#Python
- Machine Learning in Bioinformatics With Python
- DOWNLOADING DATA from UCI RREPOSITORY
- PREPROCESSING OF THE DATA
- FEATURES & LABELS
- TRAINING & TESTING of the MODELS
- PICKLING
- MAKING PREDICTIONS WITH TRAINED MODELS
- Python for Bioinformatics
- Simple Values
- Expressions
- Names & Naming Conventions
- Defining Functions
- Unlocking Python Modules
- Importing .py Python Files
- Collections
- Dictionaries
- Reading and writing files with Python.
- List Comprehensions in Python Part I of II
- List Comprehensions (Advanced) II/III
- Set, Dictionary and Conditional Comprehensions III/III
- Code Organization
- Conditionals | The Basics of Decision-Making
- While Loop
- For Loop I of II
- For Loop Part II of II
- Exception Handling
#Machine Learning
- Machine Learning in Bioinformatics With Python
- DOWNLOADING DATA from UCI RREPOSITORY
- PREPROCESSING OF THE DATA
- FEATURES & LABELS
- TRAINING & TESTING of the MODELS
- PICKLING
- MAKING PREDICTIONS WITH TRAINED MODELS
#Beginner
- Machine Learning in Bioinformatics With Python
- DOWNLOADING DATA from UCI RREPOSITORY
- PREPROCESSING OF THE DATA
- FEATURES & LABELS
- TRAINING & TESTING of the MODELS
- PICKLING
- MAKING PREDICTIONS WITH TRAINED MODELS
#UCI Repository
#Artificial Intelligence
#Pandas
#NumPy
#Scikit-learn
#UCI Machine Learning Repository
#Breast cancer dataset
#Downloading Data
#Preprocessing
#CSV
#Missing Values
#Data Cleaning
#Features
#Labels
#Binary Classification
#Training
#Bioinformatics
- TRAINING & TESTING of the MODELS
- PICKLING
- MAKING PREDICTIONS WITH TRAINED MODELS
- Python for Bioinformatics
- Simple Values
- Expressions
- Names & Naming Conventions
- Defining Functions
- Unlocking Python Modules
- Importing .py Python Files
- Collections
- Dictionaries
- Reading and writing files with Python.
- List Comprehensions in Python Part I of II
- List Comprehensions (Advanced) II/III
- Set, Dictionary and Conditional Comprehensions III/III
- Code Organization
- Conditionals | The Basics of Decision-Making
- While Loop
- For Loop I of II
- For Loop Part II of II
- Exception Handling
- Why Biologists need to learn BASH?
- How to open Bash on MacOS, Windows or Linux
- A Biologist's Guide to Unix File System Navigation
- Navigating Bioinformatics Datasets
- Viewing File Contents in Bioinformatics
- Managing Files and Directories in Unix
- The Power of Pipes
- Grep
- Uniq and History
- Mastering For Loops in Bash
- From Command Line to Script
- VIM - The Text Editor That Lives Where Your Data Lives
- The Hitchhiker's Guide to Designing a Short-Read WGS Pipeline
- Raw Read QC - Don't Skip This Critical First Step.
- Five VIM Commands You'll Use 500 Times a Week
- Delete Entire Lines in One Keystroke
- SLURM Commands
- Cut, Paste, and Transform Text in Seconds
- Search and Replace Like a Pro
- AWK - The Swiss Army Knife of Bioinformatics Data Processing
- Execute Commands Without Leaving Your Editor
- Copy, Insert, and Customize Like a Power User
- Your Personal Configuration and Getting Help
- The Complete Mastery Challenge
#Testing
#Accuracy
#SVC Classifier
#Logistic Regression
#Pickling
#Saving Models
#Loading Models
#Accuracy.
#Predictions
#Trained models
#Benign
#Malignant
#Basics
- Python for Bioinformatics
- Simple Values
- Expressions
- Names & Naming Conventions
- Defining Functions
- Unlocking Python Modules
- Importing .py Python Files
- Collections
- Dictionaries
- Reading and writing files with Python.
- List Comprehensions in Python Part I of II
- List Comprehensions (Advanced) II/III
- Set, Dictionary and Conditional Comprehensions III/III
- Code Organization
- Conditionals | The Basics of Decision-Making
- While Loop
- For Loop I of II
- For Loop Part II of II
- Exception Handling
#DNA
#RNA
#Sequences
#BASH
- Why Biologists need to learn BASH?
- How to open Bash on MacOS, Windows or Linux
- A Biologist's Guide to Unix File System Navigation
- Navigating Bioinformatics Datasets
- Viewing File Contents in Bioinformatics
- Managing Files and Directories in Unix
- The Power of Pipes
- Grep
- Uniq and History
- Mastering SFTP and rsync for Bioinformatics Data Transfers
- Mastering For Loops in Bash
- From Command Line to Script
- SLURM Commands
- Data Integrity 101 | Verifying Your Files with MD5 Checksums
- AWK - The Swiss Army Knife of Bioinformatics Data Processing
#Essentials
- Why Biologists need to learn BASH?
- How to open Bash on MacOS, Windows or Linux
- A Biologist's Guide to Unix File System Navigation
- Navigating Bioinformatics Datasets
- Viewing File Contents in Bioinformatics
- Managing Files and Directories in Unix
- The Power of Pipes
- Grep
- Uniq and History
- Mastering For Loops in Bash
- From Command Line to Script
#Bash Scripting
- Why Biologists need to learn BASH?
- How to open Bash on MacOS, Windows or Linux
- A Biologist's Guide to Unix File System Navigation
- Navigating Bioinformatics Datasets
- Viewing File Contents in Bioinformatics
- Managing Files and Directories in Unix
- The Power of Pipes
- Grep
- Uniq and History
- Mastering For Loops in Bash
- From Command Line to Script
- SLURM Commands
#HPC
- Why Biologists need to learn BASH?
- How to open Bash on MacOS, Windows or Linux
- A Biologist's Guide to Unix File System Navigation
- Navigating Bioinformatics Datasets
- Viewing File Contents in Bioinformatics
- Managing Files and Directories in Unix
- The Power of Pipes
- Grep
- Uniq and History
- Mastering For Loops in Bash
- From Command Line to Script
- SLURM Commands
- AWK - The Swiss Army Knife of Bioinformatics Data Processing
#Command Line Interface
- Why Biologists need to learn BASH?
- How to open Bash on MacOS, Windows or Linux
- A Biologist's Guide to Unix File System Navigation
- Navigating Bioinformatics Datasets
- Viewing File Contents in Bioinformatics
- Managing Files and Directories in Unix
- The Power of Pipes
- Grep
- Uniq and History
- Mastering For Loops in Bash
- From Command Line to Script
#Bash Commands
- Why Biologists need to learn BASH?
- How to open Bash on MacOS, Windows or Linux
- A Biologist's Guide to Unix File System Navigation
- Navigating Bioinformatics Datasets
- Viewing File Contents in Bioinformatics
- Managing Files and Directories in Unix
- The Power of Pipes
- Grep
- Uniq and History
- Mastering For Loops in Bash
- From Command Line to Script
#Mac
- How to open Bash on MacOS, Windows or Linux
- A Biologist's Guide to Unix File System Navigation
- Navigating Bioinformatics Datasets
- Viewing File Contents in Bioinformatics
- Managing Files and Directories in Unix
- The Power of Pipes
- Grep
- Uniq and History
- Mastering For Loops in Bash
- From Command Line to Script
- VIM - The Text Editor That Lives Where Your Data Lives
- Five VIM Commands You'll Use 500 Times a Week
- Delete Entire Lines in One Keystroke
- Cut, Paste, and Transform Text in Seconds
- Search and Replace Like a Pro
- Execute Commands Without Leaving Your Editor
- Copy, Insert, and Customize Like a Power User
- Your Personal Configuration and Getting Help
- The Complete Mastery Challenge
#Windows
- How to open Bash on MacOS, Windows or Linux
- A Biologist's Guide to Unix File System Navigation
- Navigating Bioinformatics Datasets
- Viewing File Contents in Bioinformatics
- Managing Files and Directories in Unix
- The Power of Pipes
- Grep
- Uniq and History
- Mastering For Loops in Bash
- From Command Line to Script
- VIM - The Text Editor That Lives Where Your Data Lives
- Five VIM Commands You'll Use 500 Times a Week
- Delete Entire Lines in One Keystroke
- Cut, Paste, and Transform Text in Seconds
- Search and Replace Like a Pro
- Execute Commands Without Leaving Your Editor
- Copy, Insert, and Customize Like a Power User
- Your Personal Configuration and Getting Help
- The Complete Mastery Challenge
#Linux
- How to open Bash on MacOS, Windows or Linux
- A Biologist's Guide to Unix File System Navigation
- Navigating Bioinformatics Datasets
- Viewing File Contents in Bioinformatics
- Managing Files and Directories in Unix
- The Power of Pipes
- Grep
- Uniq and History
- Mastering For Loops in Bash
- From Command Line to Script
- VIM - The Text Editor That Lives Where Your Data Lives
- Five VIM Commands You'll Use 500 Times a Week
- Delete Entire Lines in One Keystroke
- Cut, Paste, and Transform Text in Seconds
- Search and Replace Like a Pro
- Execute Commands Without Leaving Your Editor
- Copy, Insert, and Customize Like a Power User
- Your Personal Configuration and Getting Help
- The Complete Mastery Challenge
#Terminal
- Mastering SFTP and rsync for Bioinformatics Data Transfers
- Data Integrity 101 | Verifying Your Files with MD5 Checksums
#Varients
- A Systematic Approach to Complex Variant Interpretation in Rare Disease Genomics
- Merging Three Variants Into One Truth
#SNVs
- A Systematic Approach to Complex Variant Interpretation in Rare Disease Genomics
- Merging Three Variants Into One Truth
#SVs
- A Systematic Approach to Complex Variant Interpretation in Rare Disease Genomics
- Merging Three Variants Into One Truth
#WGS Data
- A Systematic Approach to Complex Variant Interpretation in Rare Disease Genomics
- Merging Three Variants Into One Truth
#CLI
- VIM - The Text Editor That Lives Where Your Data Lives
- Five VIM Commands You'll Use 500 Times a Week
- Delete Entire Lines in One Keystroke
- SLURM Commands
- Cut, Paste, and Transform Text in Seconds
- Search and Replace Like a Pro
- AWK - The Swiss Army Knife of Bioinformatics Data Processing
- Execute Commands Without Leaving Your Editor
- Copy, Insert, and Customize Like a Power User
- Your Personal Configuration and Getting Help
- The Complete Mastery Challenge
#VIM
- VIM - The Text Editor That Lives Where Your Data Lives
- Five VIM Commands You'll Use 500 Times a Week
- Delete Entire Lines in One Keystroke
- Cut, Paste, and Transform Text in Seconds
- Search and Replace Like a Pro
- Execute Commands Without Leaving Your Editor
- Copy, Insert, and Customize Like a Power User
- Your Personal Configuration and Getting Help
- The Complete Mastery Challenge
#text-edittor
- VIM - The Text Editor That Lives Where Your Data Lives
- Delete Entire Lines in One Keystroke
- Cut, Paste, and Transform Text in Seconds
- Search and Replace Like a Pro
- Execute Commands Without Leaving Your Editor
- Copy, Insert, and Customize Like a Power User
- Your Personal Configuration and Getting Help
- The Complete Mastery Challenge
#screen-based
- VIM - The Text Editor That Lives Where Your Data Lives
- Delete Entire Lines in One Keystroke
- Cut, Paste, and Transform Text in Seconds
- Search and Replace Like a Pro
- Execute Commands Without Leaving Your Editor
- Copy, Insert, and Customize Like a Power User
- Your Personal Configuration and Getting Help
- The Complete Mastery Challenge
#Pipeline
- The Hitchhiker's Guide to Designing a Short-Read WGS Pipeline
- Raw Read QC - Don't Skip This Critical First Step.
#WGS
- The Hitchhiker's Guide to Designing a Short-Read WGS Pipeline
- Raw Read QC - Don't Skip This Critical First Step.
#Short Read
- The Hitchhiker's Guide to Designing a Short-Read WGS Pipeline
- Raw Read QC - Don't Skip This Critical First Step.
#SNV
- The Hitchhiker's Guide to Designing a Short-Read WGS Pipeline
- Raw Read QC - Don't Skip This Critical First Step.
#SV
- The Hitchhiker's Guide to Designing a Short-Read WGS Pipeline
- Raw Read QC - Don't Skip This Critical First Step.
#Tools
- The Hitchhiker's Guide to Designing a Short-Read WGS Pipeline
- Raw Read QC - Don't Skip This Critical First Step.
#Cluster
#SLURM
#md5
#AWK